Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005786annotation not available (55 aa)    
Predicted Functional Partners:
MYCBP2
MYC binding protein 2.
    
 0.975
MAP2K7
Mitogen-activated protein kinase kinase 7.
    
 0.949
MAP3K13
Mitogen-activated protein kinase kinase kinase 13.
     
  0.911
CASP9
Caspase 9.
     
 0.723
MBIP
MAP3K12 binding inhibitory protein 1.
    
 
 0.644
TARS1
threonyl-tRNA synthetase 1.
      
 0.632
DLK1
Delta like non-canonical Notch ligand 1.
      
 0.570
ENSCAPP00000001930
annotation not available
      
 0.567
TARS3
threonyl-tRNA synthetase 3.
      
 0.567
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
    
 
 0.509
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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