Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005791annotation not available (322 aa)    
Predicted Functional Partners:
NFIA
Nuclear factor I A.
   
 
 0.975
NFIX
Nuclear factor I X.
   
 
 0.973
ENSCAPP00000018031
annotation not available
 
      0.891
ENSCAPP00000006136
annotation not available
    
 
 0.683
NF1
Neurofibromin 1.
      
 0.633
ENSCAPP00000005682
annotation not available
    
 
 0.599
NFATC4
Nuclear factor of activated T cells 4.
    
 
 0.497
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 
 0.477
ENSCAPP00000017764
annotation not available
      
 0.450
ENSCAPP00000007564
annotation not available
    
 
 0.447
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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