ENSCAPP00000005792 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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Textmining

[Homology]

Score

ENSCAPP00000005792

annotation not available (413 aa)

Predicted Functional Partners:

SUZ12

0.998

EZH1

0.998

EZH2

0.997

ENSCAPP00000013913

0.995

JARID2

0.995

ENSCAPP00000016119

0.973

CBX4

0.958

ENSCAPP00000001714

0.952

ENSCAPP00000004252

0.952

ENSCAPP00000006354

0.952

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBX4	ENSCAPP00000001714	ENSCAPP00000007761	ENSCAPP00000001714	Chromobox 4.	annotation not available	0.742
CBX4	ENSCAPP00000004252	ENSCAPP00000007761	ENSCAPP00000004252	Chromobox 4.	annotation not available	0.742
CBX4	ENSCAPP00000005792	ENSCAPP00000007761	ENSCAPP00000005792	Chromobox 4.	annotation not available	0.958
CBX4	ENSCAPP00000006354	ENSCAPP00000007761	ENSCAPP00000006354	Chromobox 4.	annotation not available	0.742
CBX4	ENSCAPP00000013913	ENSCAPP00000007761	ENSCAPP00000013913	Chromobox 4.	annotation not available	0.969
CBX4	ENSCAPP00000016119	ENSCAPP00000007761	ENSCAPP00000016119	Chromobox 4.	annotation not available	0.955
CBX4	EZH1	ENSCAPP00000007761	ENSCAPP00000008111	Chromobox 4.	Enhancer of zeste 1 polycomb repressive complex 2 subunit.	0.974
CBX4	EZH2	ENSCAPP00000007761	ENSCAPP00000011768	Chromobox 4.	Enhancer of zeste 2 polycomb repressive complex 2 subunit.	0.967
CBX4	JARID2	ENSCAPP00000007761	ENSCAPP00000014041	Chromobox 4.	Jumonji and AT-rich interaction domain containing 2.	0.936
CBX4	SUZ12	ENSCAPP00000007761	ENSCAPP00000003981	Chromobox 4.	SUZ12 polycomb repressive complex 2 subunit.	0.959
ENSCAPP00000001714	CBX4	ENSCAPP00000001714	ENSCAPP00000007761	annotation not available	Chromobox 4.	0.742
ENSCAPP00000001714	ENSCAPP00000005792	ENSCAPP00000001714	ENSCAPP00000005792	annotation not available	annotation not available	0.952
ENSCAPP00000001714	ENSCAPP00000013913	ENSCAPP00000001714	ENSCAPP00000013913	annotation not available	annotation not available	0.965
ENSCAPP00000001714	ENSCAPP00000016119	ENSCAPP00000001714	ENSCAPP00000016119	annotation not available	annotation not available	0.964
ENSCAPP00000001714	EZH1	ENSCAPP00000001714	ENSCAPP00000008111	annotation not available	Enhancer of zeste 1 polycomb repressive complex 2 subunit.	0.934
ENSCAPP00000001714	EZH2	ENSCAPP00000001714	ENSCAPP00000011768	annotation not available	Enhancer of zeste 2 polycomb repressive complex 2 subunit.	0.962
ENSCAPP00000001714	JARID2	ENSCAPP00000001714	ENSCAPP00000014041	annotation not available	Jumonji and AT-rich interaction domain containing 2.	0.913
ENSCAPP00000001714	SUZ12	ENSCAPP00000001714	ENSCAPP00000003981	annotation not available	SUZ12 polycomb repressive complex 2 subunit.	0.969
ENSCAPP00000004252	CBX4	ENSCAPP00000004252	ENSCAPP00000007761	annotation not available	Chromobox 4.	0.742
ENSCAPP00000004252	ENSCAPP00000005792	ENSCAPP00000004252	ENSCAPP00000005792	annotation not available	annotation not available	0.952