STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FXR1FMR1 autosomal homolog 1. (656 aa)    
Predicted Functional Partners:
FXR2
FMR1 autosomal homolog 2.
   
 
 0.994
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.990
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.979
FMR1
FMRP translational regulator 1.
   
   0.971
TDRD3
Tudor domain containing 3.
    
 
 0.966
AGO2
Argonaute RISC catalytic component 2.
    
 0.952
ENSCAPP00000005247
annotation not available
    
 
 0.936
UBAP2L
Ubiquitin associated protein 2 like.
    
 
 0.936
SERBP1
SERPINE1 mRNA binding protein 1.
   
 0.925
CEP63
Centrosomal protein 63.
    
   0.911
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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