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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX15DEAH-box helicase 15. (688 aa)    
Predicted Functional Partners:
RBM17
RNA binding motif protein 17.
   
 0.999
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.999
BUD31
BUD31 homolog.
   
 0.998
NOP58
NOP58 ribonucleoprotein.
   
 0.998
TFIP11
Tuftelin interacting protein 11.
   
 0.998
CDC5L
Cell division cycle 5 like.
   
 0.998
ABT1
Activator of basal transcription 1.
   
 0.997
ENSCAPP00000001291
annotation not available
  
 0.997
BMS1
BMS1 ribosome biogenesis factor.
   
 0.997
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.997
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.