LCT protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LCT

Lactase. (1818 aa)

Predicted Functional Partners:

GLB1

0.957

GALM

0.935

LALBA

0.910

HKDC1

0.909

GCK

0.909

HK3

0.909

HK2

0.909

ENSCAPP00000000849

0.871

ENSCAPP00000007262

0.871

ENSCAPP00000000457

0.839

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000000457	ENSCAPP00000000849	ENSCAPP00000000457	ENSCAPP00000000849	annotation not available	annotation not available	0.601
ENSCAPP00000000457	ENSCAPP00000007262	ENSCAPP00000000457	ENSCAPP00000007262	annotation not available	annotation not available	0.601
ENSCAPP00000000457	GALM	ENSCAPP00000000457	ENSCAPP00000011674	annotation not available	Galactose mutarotase.	0.846
ENSCAPP00000000457	GCK	ENSCAPP00000000457	ENSCAPP00000016450	annotation not available	Glucokinase.	0.707
ENSCAPP00000000457	GLB1	ENSCAPP00000000457	ENSCAPP00000005320	annotation not available	Galactosidase beta 1.	0.833
ENSCAPP00000000457	HK2	ENSCAPP00000000457	ENSCAPP00000017289	annotation not available	Hexokinase 2.	0.707
ENSCAPP00000000457	HK3	ENSCAPP00000000457	ENSCAPP00000017203	annotation not available	Hexokinase 3.	0.707
ENSCAPP00000000457	HKDC1	ENSCAPP00000000457	ENSCAPP00000001720	annotation not available	Hexokinase domain containing 1.	0.765
ENSCAPP00000000457	LCT	ENSCAPP00000000457	ENSCAPP00000005808	annotation not available	Lactase.	0.839
ENSCAPP00000000849	ENSCAPP00000000457	ENSCAPP00000000849	ENSCAPP00000000457	annotation not available	annotation not available	0.601
ENSCAPP00000000849	GALM	ENSCAPP00000000849	ENSCAPP00000011674	annotation not available	Galactose mutarotase.	0.876
ENSCAPP00000000849	GCK	ENSCAPP00000000849	ENSCAPP00000016450	annotation not available	Glucokinase.	0.878
ENSCAPP00000000849	HK2	ENSCAPP00000000849	ENSCAPP00000017289	annotation not available	Hexokinase 2.	0.941
ENSCAPP00000000849	HK3	ENSCAPP00000000849	ENSCAPP00000017203	annotation not available	Hexokinase 3.	0.939
ENSCAPP00000000849	HKDC1	ENSCAPP00000000849	ENSCAPP00000001720	annotation not available	Hexokinase domain containing 1.	0.935
ENSCAPP00000000849	LCT	ENSCAPP00000000849	ENSCAPP00000005808	annotation not available	Lactase.	0.871
ENSCAPP00000007262	ENSCAPP00000000457	ENSCAPP00000007262	ENSCAPP00000000457	annotation not available	annotation not available	0.601
ENSCAPP00000007262	GALM	ENSCAPP00000007262	ENSCAPP00000011674	annotation not available	Galactose mutarotase.	0.876
ENSCAPP00000007262	GCK	ENSCAPP00000007262	ENSCAPP00000016450	annotation not available	Glucokinase.	0.882
ENSCAPP00000007262	HK2	ENSCAPP00000007262	ENSCAPP00000017289	annotation not available	Hexokinase 2.	0.942