Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFAP20Cilia and flagella associated protein 20. (186 aa)    
Predicted Functional Partners:
TBC1D32
TBC1 domain family member 32.
    
 
 0.981
CFAP161
Cilia and flagella associated protein 161.
    
 
 0.971
CLASRP
CLK4 associating serine/arginine rich protein.
   
 
 0.971
ENSCAPP00000011763
annotation not available
    
 
 0.968
EFHC1
EF-hand domain containing 1.
    
 
 0.967
NME7
NME/NM23 family member 7.
   
 
 0.965
FAM149B1
Family with sequence similarity 149 member B1.
    
 
 0.959
ENSCAPP00000006888
annotation not available
    
 
 0.955
TEKT1
Tektin 1.
    
 
 0.954
TEKT3
Tektin 3.
    
 
 0.951
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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