FGG protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

FGG

Fibrinogen gamma chain. (413 aa)

Predicted Functional Partners:

FGB

0.999

ENSCAPP00000014476

0.999

F2

0.996

ENSCAPP00000016185

0.984

FGL1

0.983

FN1

0.981

SERPINF2

0.979

THBS1

0.959

F13B

0.956

ANGPTL1

0.952

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANGPTL1	ENSCAPP00000014476	ENSCAPP00000011599	ENSCAPP00000014476	Angiopoietin like 1.	annotation not available	0.951
ANGPTL1	ENSCAPP00000016185	ENSCAPP00000011599	ENSCAPP00000016185	Angiopoietin like 1.	annotation not available	0.460
ANGPTL1	FGB	ENSCAPP00000011599	ENSCAPP00000001554	Angiopoietin like 1.	Fibrinogen beta chain.	0.949
ANGPTL1	FGG	ENSCAPP00000011599	ENSCAPP00000005816	Angiopoietin like 1.	Fibrinogen gamma chain.	0.952
ANGPTL1	FGL1	ENSCAPP00000011599	ENSCAPP00000016839	Angiopoietin like 1.	Fibrinogen like 1.	0.947
ANGPTL1	FN1	ENSCAPP00000011599	ENSCAPP00000003194	Angiopoietin like 1.	Fibronectin 1.	0.953
ANGPTL1	SERPINF2	ENSCAPP00000011599	ENSCAPP00000002589	Angiopoietin like 1.	Serpin family F member 2.	0.913
ANGPTL1	THBS1	ENSCAPP00000011599	ENSCAPP00000002104	Angiopoietin like 1.	Thrombospondin 1.	0.929
ENSCAPP00000014476	ANGPTL1	ENSCAPP00000014476	ENSCAPP00000011599	annotation not available	Angiopoietin like 1.	0.951
ENSCAPP00000014476	ENSCAPP00000016185	ENSCAPP00000014476	ENSCAPP00000016185	annotation not available	annotation not available	0.952
ENSCAPP00000014476	F13B	ENSCAPP00000014476	ENSCAPP00000000895	annotation not available	Coagulation factor XIII B chain.	0.914
ENSCAPP00000014476	F2	ENSCAPP00000014476	ENSCAPP00000013583	annotation not available	Coagulation factor II, thrombin.	0.998
ENSCAPP00000014476	FGB	ENSCAPP00000014476	ENSCAPP00000001554	annotation not available	Fibrinogen beta chain.	0.999
ENSCAPP00000014476	FGG	ENSCAPP00000014476	ENSCAPP00000005816	annotation not available	Fibrinogen gamma chain.	0.999
ENSCAPP00000014476	FGL1	ENSCAPP00000014476	ENSCAPP00000016839	annotation not available	Fibrinogen like 1.	0.979
ENSCAPP00000014476	FN1	ENSCAPP00000014476	ENSCAPP00000003194	annotation not available	Fibronectin 1.	0.968
ENSCAPP00000014476	SERPINF2	ENSCAPP00000014476	ENSCAPP00000002589	annotation not available	Serpin family F member 2.	0.987
ENSCAPP00000014476	THBS1	ENSCAPP00000014476	ENSCAPP00000002104	annotation not available	Thrombospondin 1.	0.961
ENSCAPP00000016185	ANGPTL1	ENSCAPP00000016185	ENSCAPP00000011599	annotation not available	Angiopoietin like 1.	0.460
ENSCAPP00000016185	ENSCAPP00000014476	ENSCAPP00000016185	ENSCAPP00000014476	annotation not available	annotation not available	0.952