Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005824annotation not available (384 aa)    
Predicted Functional Partners:
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.971
TUSC3
Tumor suppressor candidate 3.
    
   0.892
MCF2L
MCF.2 cell line derived transforming sequence like.
      
 0.841
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.835
NTNG1
Netrin G1.
    
 0.829
SLITRK3
SLIT and NTRK like family member 3.
   
 0.791
PLEKHG2
Pleckstrin homology and RhoGEF domain containing G2.
    
 0.782
ENSCAPP00000001303
annotation not available
    
 
 0.773
SLITRK2
SLIT and NTRK like family member 2.
   
 0.762
ENSCAPP00000009633
annotation not available
    
 0.756
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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