Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACTR1BActin related protein 1B. (373 aa)    
Predicted Functional Partners:
ACTR1A
Actin related protein 1A.
   
 0.999
DCTN3
Dynactin subunit 3.
    
 0.997
ENSCAPP00000008774
annotation not available
   
 0.997
DCTN5
Dynactin subunit 5.
   
 0.996
DCTN6
Dynactin subunit 6.
    
 0.996
ACTR10
Actin related protein 10.
   
 0.996
DCTN4
Dynactin subunit 4.
   
 0.996
CAPZB
Capping actin protein of muscle Z-line subunit beta.
   
 0.988
PDCL3
Phosducin like 3.
    
   0.958
TUBA8
Tubulin alpha 8.
   
 0.935
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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