STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE1APhosphodiesterase 1A. (475 aa)    
Predicted Functional Partners:
PDE1C
Phosphodiesterase 1C.
    
  0.981
GUCY1B1
Guanylate cyclase 1 soluble subunit beta 1.
     
 0.957
ENSCAPP00000017763
annotation not available
    
 0.953
GUCY2C
Guanylate cyclase 2C.
     
 0.948
AMPD3
Adenosine monophosphate deaminase 3.
     
 0.943
AMPD2
Adenosine monophosphate deaminase 2.
     
 0.939
GUCY1A1
Guanylate cyclase 1 soluble subunit alpha 1.
   
 
 0.936
GNAT3
G protein subunit alpha transducin 3.
     
 0.935
ADCY5
Adenylate cyclase 5.
     
 0.934
ADCY6
Adenylate cyclase 6.
     
 0.934
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.