Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005838annotation not available (209 aa)    
Predicted Functional Partners:
ATRN
Attractin.
      
 0.686
ARPP19
cAMP regulated phosphoprotein 19.
      
 0.591
RAB7B
RAB7B, member RAS oncogene family.
      
 0.578
SNX13
Sorting nexin 13.
      
 0.565
ENSCAPP00000012458
annotation not available
      
 0.549
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
      
 0.533
C1QB
Complement C1q B chain.
      
 0.528
ZSCAN2
Zinc finger and SCAN domain containing 2.
      
 0.525
ENSCAPP00000003819
annotation not available
      
 0.524
ENSCAPP00000004529
annotation not available
      
 0.523
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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