Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ZNF541Zinc finger protein 541. (1265 aa)    
Predicted Functional Partners:
DNTTIP1
Deoxynucleotidyltransferase terminal interacting protein 1.
    
 
 0.942
POLD1
DNA polymerase delta 1, catalytic subunit.
      
 0.825
ELMSAN1
ELM2 and Myb/SANT domain containing 1.
    
 
 0.800
ENSCAPP00000012211
annotation not available
      
 0.749
RPS6KL1
Ribosomal protein S6 kinase like 1.
   
  
 0.723
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
      
 0.690
ENSCAPP00000006441
annotation not available
      
 0.615
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
     
  0.570
SFMBT1
Scm like with four mbt domains 1.
      
 0.569
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.539
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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