STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF541Zinc finger protein 541. (1265 aa)    
Predicted Functional Partners:
DNTTIP1
Deoxynucleotidyltransferase terminal interacting protein 1.
    
 
 0.798
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.579
RPS6KL1
Ribosomal protein S6 kinase like 1.
   
  
 0.577
ENSCAPP00000012211
annotation not available
      
 0.568
POLD1
DNA polymerase delta 1, catalytic subunit.
      
 0.567
ENSCAPP00000006441
annotation not available
      
 0.563
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
      
 0.561
ELMSAN1
ELM2 and Myb/SANT domain containing 1.
    
 
0.530
IFT140
Intraflagellar transport 140.
      
 0.529
SLFNL1
Schlafen like 1.
  
     0.424
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.