ENSCAPP00000005843 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

ENSCAPP00000005843

annotation not available (399 aa)

Predicted Functional Partners:

GTPBP8

0.739

SPRYD4

0.663

ENSCAPP00000014203

0.662

ENSCAPP00000001062

0.641

ERO1B

0.641

RER1

0.634

ATP6V0A2

0.626

ENSCAPP00000001366

0.612

SLC7A1

0.594

ENSCAPP00000002177

0.570

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP6V0A2	ENSCAPP00000005843	ENSCAPP00000011636	ENSCAPP00000005843	ATPase H+ transporting V0 subunit a2.	annotation not available	0.626
ENSCAPP00000001062	ENSCAPP00000005843	ENSCAPP00000001062	ENSCAPP00000005843	annotation not available	annotation not available	0.641
ENSCAPP00000001062	ERO1B	ENSCAPP00000001062	ENSCAPP00000016087	annotation not available	Endoplasmic reticulum oxidoreductase 1 beta.	0.453
ENSCAPP00000001366	ENSCAPP00000005843	ENSCAPP00000001366	ENSCAPP00000005843	annotation not available	annotation not available	0.612
ENSCAPP00000002177	ENSCAPP00000005843	ENSCAPP00000002177	ENSCAPP00000005843	annotation not available	annotation not available	0.570
ENSCAPP00000002177	RER1	ENSCAPP00000002177	ENSCAPP00000001626	annotation not available	Retention in endoplasmic reticulum sorting receptor 1.	0.436
ENSCAPP00000005843	ATP6V0A2	ENSCAPP00000005843	ENSCAPP00000011636	annotation not available	ATPase H+ transporting V0 subunit a2.	0.626
ENSCAPP00000005843	ENSCAPP00000001062	ENSCAPP00000005843	ENSCAPP00000001062	annotation not available	annotation not available	0.641
ENSCAPP00000005843	ENSCAPP00000001366	ENSCAPP00000005843	ENSCAPP00000001366	annotation not available	annotation not available	0.612
ENSCAPP00000005843	ENSCAPP00000002177	ENSCAPP00000005843	ENSCAPP00000002177	annotation not available	annotation not available	0.570
ENSCAPP00000005843	ENSCAPP00000014203	ENSCAPP00000005843	ENSCAPP00000014203	annotation not available	annotation not available	0.662
ENSCAPP00000005843	ERO1B	ENSCAPP00000005843	ENSCAPP00000016087	annotation not available	Endoplasmic reticulum oxidoreductase 1 beta.	0.641
ENSCAPP00000005843	GTPBP8	ENSCAPP00000005843	ENSCAPP00000002637	annotation not available	GTP binding protein 8 (putative).	0.739
ENSCAPP00000005843	RER1	ENSCAPP00000005843	ENSCAPP00000001626	annotation not available	Retention in endoplasmic reticulum sorting receptor 1.	0.634
ENSCAPP00000005843	SLC7A1	ENSCAPP00000005843	ENSCAPP00000014693	annotation not available	Solute carrier family 7 member 1.	0.594
ENSCAPP00000005843	SPRYD4	ENSCAPP00000005843	ENSCAPP00000002241	annotation not available	SPRY domain containing 4.	0.663
ENSCAPP00000014203	ENSCAPP00000005843	ENSCAPP00000014203	ENSCAPP00000005843	annotation not available	annotation not available	0.662
ERO1B	ENSCAPP00000001062	ENSCAPP00000016087	ENSCAPP00000001062	Endoplasmic reticulum oxidoreductase 1 beta.	annotation not available	0.453
ERO1B	ENSCAPP00000005843	ENSCAPP00000016087	ENSCAPP00000005843	Endoplasmic reticulum oxidoreductase 1 beta.	annotation not available	0.641
GTPBP8	ENSCAPP00000005843	ENSCAPP00000002637	ENSCAPP00000005843	GTP binding protein 8 (putative).	annotation not available	0.739