STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDCL3Phosducin like 3. (243 aa)    
Predicted Functional Partners:
CCT2
Chaperonin containing TCP1 subunit 2.
   
 
 0.971
CCT4
Chaperonin containing TCP1 subunit 4.
    
 
 0.971
CCT3
Chaperonin containing TCP1 subunit 3.
    
 
 0.967
ENSCAPP00000003376
annotation not available
    
 
 0.961
ENSCAPP00000009606
annotation not available
   
   0.959
FBXW4
F-box and WD repeat domain containing 4.
    
   0.959
ACTR1B
Actin related protein 1B.
    
   0.958
ENSCAPP00000000754
annotation not available
   
 
 0.933
ENSCAPP00000014670
annotation not available
   
 
 0.933
ENSCAPP00000005325
annotation not available
    
 
 0.902
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.