Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM237Transmembrane protein 237. (358 aa)    
Predicted Functional Partners:
TMEM67
Transmembrane protein 67.
   
  
 0.865
TMEM231
Transmembrane protein 231.
      
 0.849
TCTN1
Tectonic family member 1.
      
 0.824
ENSCAPP00000010579
annotation not available
      
 0.822
EPX
Eosinophil peroxidase.
    
   0.794
TMEM107
Transmembrane protein 107.
   
 
 0.677
NPHP1
Nephrocystin 1.
   
 
 0.677
TMEM17
Transmembrane protein 17.
      
 0.648
PDE6D
Phosphodiesterase 6D.
     
 0.647
CEP290
Centrosomal protein 290.
   
 
 0.632
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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