STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEMIN5Gem nuclear organelle associated protein 5. (1343 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.995
DDX20
DEAD-box helicase 20.
   
 0.993
GEMIN4
Gem nuclear organelle associated protein 4.
   
 0.983
GEMIN8
Gem nuclear organelle associated protein 8.
    
 0.981
GEMIN7
Gem nuclear organelle associated protein 7.
    
 0.981
STRAP
Serine/threonine kinase receptor associated protein.
    
 0.980
ENSCAPP00000009578
annotation not available
   
 0.977
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
    
 0.960
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
  0.952
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1.
    
 0.950
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.