STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPOUT1SPOUT domain containing methyltransferase 1. (371 aa)    
Predicted Functional Partners:
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  
 0.898
WDR46
WD repeat domain 46.
   
    0.804
ENSCAPP00000014662
annotation not available
   
   0.795
UTP11
UTP11 small subunit processome component.
   
   0.787
NOC4L
Nucleolar complex associated 4 homolog.
   
    0.752
RRP8
Ribosomal RNA processing 8.
   
  
 0.729
RPF2
Ribosome production factor 2 homolog.
   
   0.722
WDR36
WD repeat domain 36.
   
    0.696
KRR1
KRR1 small subunit processome component homolog.
   
   0.696
TRUB2
TruB pseudouridine synthase family member 2.
  
 
 0.695
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.