STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT1Synaptotagmin 1. (382 aa)    
Predicted Functional Partners:
SNAP25
Synaptosome associated protein 25.
   
 0.991
ENSCAPP00000005959
annotation not available
   
 0.973
S100A13
S100 calcium binding protein A13.
    
 
 0.967
VAMP3
Vesicle associated membrane protein 3.
    
 0.949
STON2
Stonin 2.
   
 0.935
FGF1
Fibroblast growth factor 1.
    
 
 0.921
VAMP1
Vesicle associated membrane protein 1.
   
 0.896
STX1A
Syntaxin 1A.
   
 0.879
RAB3A
RAB3A, member RAS oncogene family.
   
 0.854
STX1B
Syntaxin 1B.
   
 0.847
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.