STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005876annotation not available (333 aa)    
Predicted Functional Partners:
NUP214
Nucleoporin 214.
    
 0.931
GLE1
GLE1 RNA export mediator.
    
 0.924
NUP88
Nucleoporin 88.
    
 
 0.852
CTIF
Cap binding complex dependent translation initiation factor.
    
   0.850
DDX25
DEAD-box helicase 25.
    
   0.842
MCM3AP
Minichromosome maintenance complex component 3 associated protein.
   
 0.833
ENSCAPP00000003757
annotation not available
    
 
 0.793
NUP98
Nucleoporin 98.
   
 0.786
RANBP2
RAN binding protein 2.
   
 0.774
NXF1
Nuclear RNA export factor 1.
   
 
 0.696
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.