Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYBMYB proto-oncogene, transcription factor. (630 aa)    
Predicted Functional Partners:
EP300
E1A binding protein p300.
    
 
 0.975
LIN37
Lin-37 DREAM MuvB core complex component.
    
 0.970
CREBBP
CREB binding protein.
    
 
 0.967
FOXJ2
Forkhead box J2.
    
 0.959
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.954
RFX1
Regulatory factor X1.
    
 
 0.953
FBXW7
F-box and WD repeat domain containing 7.
    
 
 0.942
LIN54
Lin-54 DREAM MuvB core complex component.
    
 0.932
TESMIN
Testis expressed metallothionein like protein.
    
 0.910
SPI1
Spi-1 proto-oncogene.
     
 0.902
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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