Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A18Solute carrier family 25 member 18. (317 aa)    
Predicted Functional Partners:
ENSCAPP00000008006
annotation not available
   
   0.997
GC
GC vitamin D binding protein.
      
 0.690
AIFM3
Apoptosis inducing factor mitochondria associated 3.
   
  
 0.644
ENSCAPP00000000815
annotation not available
      
 0.588
HEATR6
HEAT repeat containing 6.
      
 0.583
TMEM72
Transmembrane protein 72.
      
 0.583
ENSCAPP00000001550
annotation not available
    
 
 0.578
ST6GALNAC1
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1.
      
 0.572
ANTKMT
Adenine nucleotide translocase lysine methyltransferase.
      
 0.570
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
      
 0.556
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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