STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFKB1Nuclear factor kappa B subunit 1. (966 aa)    
Predicted Functional Partners:
ENSCAPP00000015456
annotation not available
   
0.998
ENSCAPP00000011154
annotation not available
   
0.996
ENSCAPP00000016597
annotation not available
   
0.994
REL
REL proto-oncogene, NF-kB subunit.
   
0.986
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.983
NFKB2
Nuclear factor kappa B subunit 2.
  
0.980
NFKBIB
NFKB inhibitor beta.
   
0.978
BCL3
BCL3 transcription coactivator.
   
0.977
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.976
ENSCAPP00000002942
annotation not available
   
 0.974
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.