Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBED4Zinc finger BED-type containing 4. (1165 aa)    
Predicted Functional Partners:
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
    
 
 0.898
RDH13
Retinol dehydrogenase 13.
    
 
 0.681
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.661
LYG1
Lysozyme g1.
      
 0.627
POGK
Pogo transposable element derived with KRAB domain.
   
  
 0.614
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
      
 0.613
MLF2
Myeloid leukemia factor 2.
    
 
 0.605
ENSCAPP00000003625
annotation not available
    
 
 0.599
FEM1A
Fem-1 homolog A.
    
 0.595
ENSCAPP00000003166
annotation not available
    
 
 0.595
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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