STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRPPACDP-L-ribitol pyrophosphorylase A. (332 aa)    
Predicted Functional Partners:
FKTN
Fukutin.
     
 0.969
WDR90
WD repeat domain 90.
    
 0.849
MCM3AP
Minichromosome maintenance complex component 3 associated protein.
    
 0.830
ENSCAPP00000001190
annotation not available
    
 0.823
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.817
PCID2
PCI domain containing 2.
    
 0.802
B4GAT1
Beta-1,4-glucuronyltransferase 1.
      
 0.801
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 0.801
RANBP2
RAN binding protein 2.
   
 0.780
ENSCAPP00000013692
annotation not available
  
   
 0.731
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.