Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RALYRALY heterogeneous nuclear ribonucleoprotein. (300 aa)    
Predicted Functional Partners:
ENSCAPP00000006614
annotation not available
   
  0.995
CELF1
CUGBP Elav-like family member 1.
    
 
 0.961
ENSCAPP00000008970
annotation not available
    
   0.926
ENSCAPP00000012160
annotation not available
    
   0.926
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.916
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.911
FUS
FUS RNA binding protein.
    
 0.867
ENSCAPP00000000143
annotation not available
    
 0.858
EIF2S2
Eukaryotic translation initiation factor 2 subunit beta.
   
 0.850
DHX9
DExH-box helicase 9.
   
 0.848
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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