STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL25Kelch like family member 25. (589 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.985
NFE2L2
Nuclear factor, erythroid 2 like 2.
    
  0.864
NUDCD3
NudC domain containing 3.
    
   0.853
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.778
PEF1
penta-EF-hand domain containing 1.
    
 0.761
PDCD6
Programmed cell death 6.
    
 0.761
BTBD7
BTB domain containing 7.
      
 0.740
USP25
Ubiquitin specific peptidase 25.
    
 
 0.703
KBTBD8
Kelch repeat and BTB domain containing 8.
    
 0.696
USP19
Ubiquitin specific peptidase 19.
     
 0.681
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.