STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005908annotation not available (149 aa)    
Predicted Functional Partners:
ENSCAPP00000010142
annotation not available
   
 
 0.955
RAB7A
RAB7A, member RAS oncogene family.
    
 0.917
RAB7B
RAB7B, member RAS oncogene family.
     
 0.807
GABARAPL2
GABA type A receptor associated protein like 2.
    
 
 0.590
MICU2
Mitochondrial calcium uptake 2.
    
 0.589
MICU1
Mitochondrial calcium uptake 1.
    
 0.589
ENSCAPP00000004081
annotation not available
  
 
  0.580
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.560
CXCR6
C-X-C motif chemokine receptor 6.
      
 0.557
LZTFL1
Leucine zipper transcription factor like 1.
      
 0.547
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.