Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005909annotation not available (588 aa)    
Predicted Functional Partners:
AKAP3
A-kinase anchoring protein 3.
   
  
 0.775
ENSCAPP00000006591
annotation not available
   
  
 0.775
C7orf31
Chromosome 7 open reading frame 31.
   
   0.758
ENSCAPP00000006888
annotation not available
   
  
 0.752
TRIM42
Tripartite motif containing 42.
   
   0.708
ENSCAPP00000016589
annotation not available
   
    0.708
RBX1
Ring-box 1.
    
 0.687
DNAH10
Dynein axonemal heavy chain 10.
   
  
 0.683
TEKT5
Tektin 5.
   
 
 0.659
TEKT3
Tektin 3.
   
 
 0.659
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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