Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005912annotation not available (136 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B.
     
 0.746
ENSCAPP00000006828
annotation not available
     
 0.719
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
      
 0.647
ENSCAPP00000016084
annotation not available
      
 0.627
MYLIP
Myosin regulatory light chain interacting protein.
      
 0.581
SGF29
SAGA complex associated factor 29.
      
 0.568
PLBD1
Phospholipase B domain containing 1.
   
  
 0.555
NUPR1
Nuclear protein 1, transcriptional regulator.
      
 0.550
HRH1
Histamine receptor H1.
  
   
 0.479
IL18R1
Interleukin 18 receptor 1.
   
  
 0.463
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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