Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NCAPH2non-SMC condensin II complex subunit H2. (508 aa)    
Predicted Functional Partners:
NCAPD3
non-SMC condensin II complex subunit D3.
   
 0.999
SMC2
Structural maintenance of chromosomes 2.
   
 0.999
NCAPG2
non-SMC condensin II complex subunit G2.
   
 0.999
ENSCAPP00000018369
annotation not available
   
 0.999
NCAPD2
non-SMC condensin I complex subunit D2.
   
 0.986
NCAPH
non-SMC condensin I complex subunit H.
   
 
 0.982
NCAPG
non-SMC condensin I complex subunit G.
   
 0.981
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
   0.826
ZRANB1
Zinc finger RANBP2-type containing 1.
    
   0.785
SMC3
Structural maintenance of chromosomes 3.
    
 0.782
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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