STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF1Rho guanine nucleotide exchange factor 1. (978 aa)    
Predicted Functional Partners:
GNA13
G protein subunit alpha 13.
    
 0.998
GNA12
G protein subunit alpha 12.
    
 0.990
ENSCAPP00000012909
annotation not available
   
 0.986
ENSCAPP00000006439
annotation not available
   
 0.985
ARHGEF7
Rho guanine nucleotide exchange factor 7.
   
 0.935
ENSCAPP00000009388
annotation not available
    
 0.927
ARHGEF11
Rho guanine nucleotide exchange factor 11.
     
 0.927
ARHGEF28
Rho guanine nucleotide exchange factor 28.
    
 0.926
ENSCAPP00000000853
annotation not available
    
 0.925
PTK2B
Protein tyrosine kinase 2 beta.
   
 0.922
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.