STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECTIN4Nectin cell adhesion molecule 4. (507 aa)    
Predicted Functional Partners:
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
 0.671
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.671
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
    
  0.644
ENSCAPP00000005147
annotation not available
    
  0.620
HABP2
Hyaluronan binding protein 2.
    
  0.620
HGFAC
HGF activator.
    
  0.620
MCAM
Melanoma cell adhesion molecule.
  
 
  0.614
SASS6
SAS-6 centriolar assembly protein.
    
  0.564
STN1
STN1 subunit of CST complex.
    
  0.564
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
  0.549
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.