Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDE6CPhosphodiesterase 6C. (834 aa)    
Predicted Functional Partners:
GNAT2
G protein subunit alpha transducin 2.
   
 0.971
ADCY3
Adenylate cyclase 3.
    
 0.957
NT5E
5'-nucleotidase ecto.
     
 0.955
GUCY2C
Guanylate cyclase 2C.
    
 0.953
SLC24A1
Solute carrier family 24 member 1.
      
 0.949
ADCY5
Adenylate cyclase 5.
    
 0.947
ADCY6
Adenylate cyclase 6.
    
 0.947
ENSCAPP00000010329
annotation not available
      
 0.945
GUCY1B1
Guanylate cyclase 1 soluble subunit beta 1.
   
 0.938
GUK1
Guanylate kinase 1.
   
 
 0.936
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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