STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHGAChromogranin A. (394 aa)    
Predicted Functional Partners:
CHGB
Chromogranin B.
   
 
 0.932
ENSCAPP00000010612
annotation not available
   
 
 0.670
SCG3
Secretogranin III.
   
  
 0.626
DYRK1A
Dual specificity tyrosine phosphorylation regulated kinase 1A.
      
 0.578
ENSCAPP00000013524
annotation not available
      
 0.564
CD79A
CD79a molecule.
      
 0.563
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
      
 0.561
ENO2
Enolase 2.
      
 0.557
TPH1
Tryptophan hydroxylase 1.
      
 0.553
GHRL
Ghrelin and obestatin prepropeptide.
      
 0.552
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.