STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE3Copine 3. (432 aa)    
Predicted Functional Partners:
RNASEH2B
Ribonuclease H2 subunit B.
   
 0.776
RNASEH2A
Ribonuclease H2 subunit A.
   
 0.751
SLC7A13
Solute carrier family 7 member 13.
      
 0.547
CAPZB
Capping actin protein of muscle Z-line subunit beta.
     
 0.506
WWP1
WW domain containing E3 ubiquitin protein ligase 1.
   
 0.485
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.469
PI4KB
Phosphatidylinositol 4-kinase beta.
     
 0.430
EFHD1
EF-hand domain family member D1.
   
 
  0.410
EFHD2
EF-hand domain family member D2.
   
 
  0.410
VAMP3
Vesicle associated membrane protein 3.
   
 
  0.403
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.