TM4SF5 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TM4SF5

Transmembrane 4 L six family member 5. (221 aa)

Predicted Functional Partners:

C11orf54

0.560

VSTM5

0.429

A1CF

0.412

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1CF	TM4SF5	ENSCAPP00000017810	ENSCAPP00000005987	APOBEC1 complementation factor.	Transmembrane 4 L six family member 5.	0.412
C11orf54	TM4SF5	ENSCAPP00000003237	ENSCAPP00000005987	Chromosome 11 open reading frame 54.	Transmembrane 4 L six family member 5.	0.560
C11orf54	VSTM5	ENSCAPP00000003237	ENSCAPP00000018060	Chromosome 11 open reading frame 54.	V-set and transmembrane domain containing 5.	0.438
TM4SF5	A1CF	ENSCAPP00000005987	ENSCAPP00000017810	Transmembrane 4 L six family member 5.	APOBEC1 complementation factor.	0.412
TM4SF5	C11orf54	ENSCAPP00000005987	ENSCAPP00000003237	Transmembrane 4 L six family member 5.	Chromosome 11 open reading frame 54.	0.560
TM4SF5	VSTM5	ENSCAPP00000005987	ENSCAPP00000018060	Transmembrane 4 L six family member 5.	V-set and transmembrane domain containing 5.	0.429
VSTM5	C11orf54	ENSCAPP00000018060	ENSCAPP00000003237	V-set and transmembrane domain containing 5.	Chromosome 11 open reading frame 54.	0.438
VSTM5	TM4SF5	ENSCAPP00000018060	ENSCAPP00000005987	V-set and transmembrane domain containing 5.	Transmembrane 4 L six family member 5.	0.429