ENSCAPP00000006003 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSCAPP00000006003

annotation not available (532 aa)

Predicted Functional Partners:

RANBP2

0.999

NUP107

0.994

NUP37

0.992

ENSCAPP00000017022

0.992

SEC13

0.991

NUP98

0.990

SEH1L

0.990

NUP160

0.989

AHCTF1

0.980

NUP93

0.979

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHCTF1	ENSCAPP00000006003	ENSCAPP00000005166	ENSCAPP00000006003	AT-hook containing transcription factor 1.	annotation not available	0.980
AHCTF1	ENSCAPP00000017022	ENSCAPP00000005166	ENSCAPP00000017022	AT-hook containing transcription factor 1.	annotation not available	0.997
AHCTF1	NUP107	ENSCAPP00000005166	ENSCAPP00000001796	AT-hook containing transcription factor 1.	Nucleoporin 107.	0.997
AHCTF1	NUP160	ENSCAPP00000005166	ENSCAPP00000001795	AT-hook containing transcription factor 1.	Nucleoporin 160.	0.997
AHCTF1	NUP37	ENSCAPP00000005166	ENSCAPP00000012159	AT-hook containing transcription factor 1.	Nucleoporin 37.	0.997
AHCTF1	NUP93	ENSCAPP00000005166	ENSCAPP00000005273	AT-hook containing transcription factor 1.	Nucleoporin 93.	0.982
AHCTF1	NUP98	ENSCAPP00000005166	ENSCAPP00000003109	AT-hook containing transcription factor 1.	Nucleoporin 98.	0.997
AHCTF1	RANBP2	ENSCAPP00000005166	ENSCAPP00000009214	AT-hook containing transcription factor 1.	RAN binding protein 2.	0.946
AHCTF1	SEC13	ENSCAPP00000005166	ENSCAPP00000006799	AT-hook containing transcription factor 1.	SEC13 homolog, nuclear pore and COPII coat complex component.	0.997
AHCTF1	SEH1L	ENSCAPP00000005166	ENSCAPP00000006366	AT-hook containing transcription factor 1.	SEH1 like nucleoporin.	0.997
ENSCAPP00000006003	AHCTF1	ENSCAPP00000006003	ENSCAPP00000005166	annotation not available	AT-hook containing transcription factor 1.	0.980
ENSCAPP00000006003	ENSCAPP00000017022	ENSCAPP00000006003	ENSCAPP00000017022	annotation not available	annotation not available	0.992
ENSCAPP00000006003	NUP107	ENSCAPP00000006003	ENSCAPP00000001796	annotation not available	Nucleoporin 107.	0.994
ENSCAPP00000006003	NUP160	ENSCAPP00000006003	ENSCAPP00000001795	annotation not available	Nucleoporin 160.	0.989
ENSCAPP00000006003	NUP37	ENSCAPP00000006003	ENSCAPP00000012159	annotation not available	Nucleoporin 37.	0.992
ENSCAPP00000006003	NUP93	ENSCAPP00000006003	ENSCAPP00000005273	annotation not available	Nucleoporin 93.	0.979
ENSCAPP00000006003	NUP98	ENSCAPP00000006003	ENSCAPP00000003109	annotation not available	Nucleoporin 98.	0.990
ENSCAPP00000006003	RANBP2	ENSCAPP00000006003	ENSCAPP00000009214	annotation not available	RAN binding protein 2.	0.999
ENSCAPP00000006003	SEC13	ENSCAPP00000006003	ENSCAPP00000006799	annotation not available	SEC13 homolog, nuclear pore and COPII coat complex component.	0.991
ENSCAPP00000006003	SEH1L	ENSCAPP00000006003	ENSCAPP00000006366	annotation not available	SEH1 like nucleoporin.	0.990