ENSCAPP00000006004 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000006004

annotation not available (965 aa)

Predicted Functional Partners:

ENSCAPP00000005436

0.975

ENSCAPP00000006409

0.962

RAB25

0.905

ENSCAPP00000001369

0.859

EHD1

0.845

RAB11FIP2

0.841

ENSCAPP00000006827

0.813

ENSCAPP00000005103

0.757

MYO5C

0.757

EHD3

0.694

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHD1	EHD3	ENSCAPP00000013302	ENSCAPP00000002083	EH domain containing 1.	EH domain containing 3.	0.763
EHD1	ENSCAPP00000001369	ENSCAPP00000013302	ENSCAPP00000001369	EH domain containing 1.	annotation not available	0.915
EHD1	ENSCAPP00000006004	ENSCAPP00000013302	ENSCAPP00000006004	EH domain containing 1.	annotation not available	0.845
EHD1	RAB11FIP2	ENSCAPP00000013302	ENSCAPP00000015029	EH domain containing 1.	RAB11 family interacting protein 2.	0.957
EHD3	EHD1	ENSCAPP00000002083	ENSCAPP00000013302	EH domain containing 3.	EH domain containing 1.	0.763
EHD3	ENSCAPP00000001369	ENSCAPP00000002083	ENSCAPP00000001369	EH domain containing 3.	annotation not available	0.663
EHD3	ENSCAPP00000006004	ENSCAPP00000002083	ENSCAPP00000006004	EH domain containing 3.	annotation not available	0.694
EHD3	RAB11FIP2	ENSCAPP00000002083	ENSCAPP00000015029	EH domain containing 3.	RAB11 family interacting protein 2.	0.820
ENSCAPP00000001369	EHD1	ENSCAPP00000001369	ENSCAPP00000013302	annotation not available	EH domain containing 1.	0.915
ENSCAPP00000001369	EHD3	ENSCAPP00000001369	ENSCAPP00000002083	annotation not available	EH domain containing 3.	0.663
ENSCAPP00000001369	ENSCAPP00000005436	ENSCAPP00000001369	ENSCAPP00000005436	annotation not available	annotation not available	0.979
ENSCAPP00000001369	ENSCAPP00000006004	ENSCAPP00000001369	ENSCAPP00000006004	annotation not available	annotation not available	0.859
ENSCAPP00000001369	ENSCAPP00000006409	ENSCAPP00000001369	ENSCAPP00000006409	annotation not available	annotation not available	0.970
ENSCAPP00000001369	ENSCAPP00000006827	ENSCAPP00000001369	ENSCAPP00000006827	annotation not available	annotation not available	0.548
ENSCAPP00000001369	RAB11FIP2	ENSCAPP00000001369	ENSCAPP00000015029	annotation not available	RAB11 family interacting protein 2.	0.944
ENSCAPP00000001369	RAB25	ENSCAPP00000001369	ENSCAPP00000003390	annotation not available	RAB25, member RAS oncogene family.	0.832
ENSCAPP00000005103	ENSCAPP00000005436	ENSCAPP00000005103	ENSCAPP00000005436	annotation not available	annotation not available	0.881
ENSCAPP00000005103	ENSCAPP00000006004	ENSCAPP00000005103	ENSCAPP00000006004	annotation not available	annotation not available	0.757
ENSCAPP00000005103	ENSCAPP00000006409	ENSCAPP00000005103	ENSCAPP00000006409	annotation not available	annotation not available	0.879
ENSCAPP00000005103	RAB11FIP2	ENSCAPP00000005103	ENSCAPP00000015029	annotation not available	RAB11 family interacting protein 2.	0.778