Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006012annotation not available (161 aa)    
Predicted Functional Partners:
ENSCAPP00000004993
annotation not available
    
   0.889
PRELID1
PRELI domain containing 1.
      
 0.643
DUSP13
Dual specificity phosphatase 13.
      
 0.627
BICD1
BICD cargo adaptor 1.
      
 0.558
ENSCAPP00000008168
annotation not available
      
 0.554
LRRC17
Leucine rich repeat containing 17.
      
 0.543
TDRD3
Tudor domain containing 3.
    
   0.531
ARMC10
Armadillo repeat containing 10.
      
 0.520
ENSCAPP00000002587
annotation not available
      
 0.454
TP53I13
Tumor protein p53 inducible protein 13.
      
 0.454
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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