STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNAB1Potassium voltage-gated channel subfamily A member regulatory beta subunit 1. (268 aa)    
Predicted Functional Partners:
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
   
   0.976
KCNA5
Potassium voltage-gated channel subfamily A member 5.
   
 0.946
KCNA4
Potassium voltage-gated channel subfamily A member 4.
   
 0.946
ENSCAPP00000001109
annotation not available
    
 0.897
HAO1
Hydroxyacid oxidase 1.
   
 
 0.859
KCNA2
Potassium voltage-gated channel subfamily A member 2.
   
 0.857
ENSCAPP00000011178
annotation not available
   
 0.836
EPHX4
Epoxide hydrolase 4.
   
 
 0.827
KCNA10
Potassium voltage-gated channel subfamily A member 10.
   
 0.816
KCNV1
Potassium voltage-gated channel modifier subfamily V member 1.
    
 0.798
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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