STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006020annotation not available (719 aa)    
Predicted Functional Partners:
TNR
Tenascin R.
   
 0.980
ADAMTS4
ADAM metallopeptidase with thrombospondin type 1 motif 4.
    
 0.975
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
    
 0.973
HAPLN1
Hyaluronan and proteoglycan link protein 1.
   
 0.960
TNC
Tenascin C.
   
 0.954
COL2A1
Collagen type II alpha 1 chain.
   
 0.914
MMP13
Matrix metallopeptidase 13.
    
 0.908
FMOD
Fibromodulin.
    
 0.859
ADAMTS3
ADAM metallopeptidase with thrombospondin type 1 motif 3.
    
 0.857
MMP3
Matrix metallopeptidase 3.
    
 0.837
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.