Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006021annotation not available (313 aa)    
Predicted Functional Partners:
ENSCAPP00000013645
annotation not available
   
 
  0.872
ZSWIM5
Zinc finger SWIM-type containing 5.
     
  0.870
ZER1
Zyg-11 related cell cycle regulator.
     
  0.870
ZYG11A
Zyg-11 family member A, cell cycle regulator.
     
  0.870
ZSWIM8
Zinc finger SWIM-type containing 8.
     
 0.870
CUL2
Cullin 2.
     
 0.819
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
    
 0.814
ENSCAPP00000016562
annotation not available
    
 0.796
ASB4
Ankyrin repeat and SOCS box containing 4.
     
  0.794
ZYG11B
Zyg-11 family member B, cell cycle regulator.
     
  0.794
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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