Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TEX264Testis expressed 264, ER-phagy receptor. (311 aa)    
Predicted Functional Partners:
TMEM79
Transmembrane protein 79.
    
   0.941
CCPG1
Cell cycle progression 1.
     
 0.902
SEC62
SEC62 homolog, preprotein translocation factor.
      
 0.682
TCTE3
T-complex-associated-testis-expressed 3.
      
 0.665
ETHE1
ETHE1 persulfide dioxygenase.
      
 0.658
ATL3
Atlastin GTPase 3.
      
 0.657
ZNF428
Zinc finger protein 428.
      
 0.648
POC1A
POC1 centriolar protein A.
     
 0.604
MAS1
MAS1 proto-oncogene, G protein-coupled receptor.
      
 0.582
MED20
Mediator complex subunit 20.
      
 0.580
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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