STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYRFMyelin regulatory factor. (1081 aa)    
Predicted Functional Partners:
SPO11
SPO11 initiator of meiotic double stranded breaks.
    
 
 0.877
ICK
Intestinal cell kinase.
    
 0.827
MAK
Male germ cell associated kinase.
    
 0.827
ENSCAPP00000007362
annotation not available
    
 0.827
GRAMD2B
GRAM domain containing 2B.
    
   0.802
ENSCAPP00000005639
annotation not available
      
 0.756
RFFL
Ring finger and FYVE like domain containing E3 ubiquitin protein ligase.
      
 0.718
FA2H
Fatty acid 2-hydroxylase.
   
  
 0.713
MOGS
Mannosyl-oligosaccharide glucosidase.
     
  0.699
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
     
  0.699
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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