TNN protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TNN

Tenascin N. (1328 aa)

Predicted Functional Partners:

VTN

0.931

PLAU

0.924

TNR

0.920

TNC

0.910

SDC4

0.883

SDC1

0.882

ENSCAPP00000005147

0.875

HABP2

0.875

HGFAC

0.875

ENSCAPP00000013002

0.859

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000005147	HABP2	ENSCAPP00000005147	ENSCAPP00000006744	annotation not available	Hyaluronan binding protein 2.	0.664
ENSCAPP00000005147	HGFAC	ENSCAPP00000005147	ENSCAPP00000016228	annotation not available	HGF activator.	0.628
ENSCAPP00000005147	PLAU	ENSCAPP00000005147	ENSCAPP00000017714	annotation not available	Plasminogen activator, urokinase.	0.466
ENSCAPP00000005147	TNC	ENSCAPP00000005147	ENSCAPP00000001029	annotation not available	Tenascin C.	0.875
ENSCAPP00000005147	TNN	ENSCAPP00000005147	ENSCAPP00000006034	annotation not available	Tenascin N.	0.875
ENSCAPP00000005147	TNR	ENSCAPP00000005147	ENSCAPP00000005820	annotation not available	Tenascin R.	0.875
ENSCAPP00000005147	VTN	ENSCAPP00000005147	ENSCAPP00000002091	annotation not available	Vitronectin.	0.526
ENSCAPP00000013002	SDC1	ENSCAPP00000013002	ENSCAPP00000001663	annotation not available	Syndecan 1.	0.634
ENSCAPP00000013002	SDC4	ENSCAPP00000013002	ENSCAPP00000002962	annotation not available	Syndecan 4.	0.822
ENSCAPP00000013002	TNC	ENSCAPP00000013002	ENSCAPP00000001029	annotation not available	Tenascin C.	0.859
ENSCAPP00000013002	TNN	ENSCAPP00000013002	ENSCAPP00000006034	annotation not available	Tenascin N.	0.859
ENSCAPP00000013002	TNR	ENSCAPP00000013002	ENSCAPP00000005820	annotation not available	Tenascin R.	0.859
ENSCAPP00000013002	VTN	ENSCAPP00000013002	ENSCAPP00000002091	annotation not available	Vitronectin.	0.845
HABP2	ENSCAPP00000005147	ENSCAPP00000006744	ENSCAPP00000005147	Hyaluronan binding protein 2.	annotation not available	0.664
HABP2	HGFAC	ENSCAPP00000006744	ENSCAPP00000016228	Hyaluronan binding protein 2.	HGF activator.	0.645
HABP2	TNC	ENSCAPP00000006744	ENSCAPP00000001029	Hyaluronan binding protein 2.	Tenascin C.	0.875
HABP2	TNN	ENSCAPP00000006744	ENSCAPP00000006034	Hyaluronan binding protein 2.	Tenascin N.	0.875
HABP2	TNR	ENSCAPP00000006744	ENSCAPP00000005820	Hyaluronan binding protein 2.	Tenascin R.	0.875
HABP2	VTN	ENSCAPP00000006744	ENSCAPP00000002091	Hyaluronan binding protein 2.	Vitronectin.	0.534
HGFAC	ENSCAPP00000005147	ENSCAPP00000016228	ENSCAPP00000005147	HGF activator.	annotation not available	0.628