STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNTenascin N. (1328 aa)    
Predicted Functional Partners:
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.941
SDC4
Syndecan 4.
     
 0.934
ITGA3
Integrin subunit alpha 3.
    
 0.933
ITGA2B
Integrin subunit alpha 2b.
    
 0.933
ITGA6
Integrin subunit alpha 6.
    
 0.933
ITGA4
Integrin subunit alpha 4.
    
 0.933
ITGA7
Integrin subunit alpha 7.
    
 0.933
ITGA5
Integrin subunit alpha 5.
    
 0.933
ITGA8
Integrin subunit alpha 8.
    
 0.933
ITGAV
Integrin subunit alpha V.
    
 0.933
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.