STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006041annotation not available (161 aa)    
Predicted Functional Partners:
NUDT12
Nudix hydrolase 12.
    
 
 0.811
CASP14
Caspase 14.
    
 
 0.642
ERAP1
Endoplasmic reticulum aminopeptidase 1.
    
 0.624
TPP2
Tripeptidyl peptidase 2.
     
 0.579
ENSCAPP00000015026
annotation not available
    
   0.572
KERA
Keratocan.
    
   0.565
ENSCAPP00000005375
annotation not available
     
 0.563
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
      
 0.563
MYCBPAP
MYCBP associated protein.
   
  
 0.562
EDF1
Endothelial differentiation related factor 1.
      
 0.535
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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