Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PVALBParvalbumin. (89 aa)    
Predicted Functional Partners:
ENSCAPP00000005281
annotation not available
     
 0.907
CALB1
Calbindin 1.
      
 0.875
CALB2
Calbindin 2.
      
 0.871
GAD1
Glutamate decarboxylase 1.
   
 0.843
ENSCAPP00000004076
annotation not available
    
 0.793
ENSCAPP00000006020
annotation not available
    
 0.769
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 0.766
SDF4
Stromal cell derived factor 4.
      
 0.752
GAL
Galanin and GMAP prepropeptide.
      
 0.735
ENSCAPP00000001112
annotation not available
    
 0.728
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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