Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUP214Nucleoporin 214. (2007 aa)    
Predicted Functional Partners:
NUP88
Nucleoporin 88.
   
 0.999
ENSCAPP00000003757
annotation not available
   
 0.998
NUP98
Nucleoporin 98.
   
 0.997
NUP93
Nucleoporin 93.
   
 0.995
RANBP2
RAN binding protein 2.
   
 0.995
NUP205
Nucleoporin 205.
   
 0.995
RAE1
Ribonucleic acid export 1.
    
 0.995
NUP107
Nucleoporin 107.
   
 0.994
NUP62
Nucleoporin 62.
   
 0.994
NUP155
Nucleoporin 155.
   
 0.994
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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