STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006059annotation not available (632 aa)    
Predicted Functional Partners:
ENSCAPP00000011834
annotation not available
    
 0.952
ENSCAPP00000008934
annotation not available
 
     0.927
KPNB1
Karyopherin subunit beta 1.
    
 0.907
INSIG1
Insulin induced gene 1.
   
 0.904
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.849
NPC1
NPC intracellular cholesterol transporter 1.
   
 0.836
ENSCAPP00000006943
annotation not available
    
 0.742
EP300
E1A binding protein p300.
    
 0.733
SREBF1
Sterol regulatory element binding transcription factor 1.
    
0.711
CREBBP
CREB binding protein.
    
 0.702
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.